Refine
Year of publication
- 2015 (14) (remove)
Document Type
- Preprint (14) (remove)
Language
- English (14)
Has Fulltext
- yes (14)
Keywords
Faculty / Organisational entity
A nonlocal stochastic model for intra- and extracellular proton dynamics in a tumor is proposed.
The intracellular dynamics is governed by an SDE coupled to a reaction-diffusion
equation for the extracellular proton concentration on the macroscale. In a more general context
the existence and uniqueness of solutions for local and nonlocal
SDE-PDE systems are established allowing, in particular, to analyze the proton dynamics model both,
in its local version and the case with nonlocal path dependence.
Numerical simulations are performed
to illustrate the behavior of solutions, providing some insights into the effects of randomness on tumor acidity.
In this contribution a mortar-type method for the coupling of non-conforming NURBS surface patches is proposed. The connection of non-conforming patches with shared degrees of freedom requires mutual refinement, which propagates throughout the whole patch due to the tensor-product structure of NURBS surfaces. Thus, methods to handle non-conforming meshes are essential in NURBS-based isogeometric analysis. The main objective of this work is to provide a simple and efficient way to couple the individual patches of complex geometrical models without altering the variational formulation. The deformations of the interface control points of adjacent patches are interrelated with a master-slave relation. This relation is established numerically using the weak form of the equality of mutual deformations along the interface. With the help of this relation the interface degrees of freedom of the slave patch can be condensated out of the system. A natural connection of the patches is attained without additional terms in the weak form. The proposed method is also applicable for nonlinear computations without further measures. Linear and geometrical nonlinear examples show the high accuracy and robustness of the new method. A comparison to reference results and to computations with the Lagrange multiplier method is given.
We consider the multiscale model for glioma growth introduced in a previous work and extend it to account
for therapy effects. Thereby, three treatment strategies involving surgical resection, radio-, and
chemotherapy are compared for their efficiency. The chemotherapy relies on inhibiting the binding
of cell surface receptors to the surrounding tissue, which impairs both migration and proliferation.
We consider storage loading problems where items with uncertain weights have
to be loaded into a storage area, taking into account stacking and
payload constraints. Following the robust optimization paradigm, we propose
strict and adjustable optimization models for finite and interval-based
uncertainties. To solve these problems, exact decomposition and heuristic
solution algorithms are developed.
For strict robustness, we also present a compact formulation based
on a characterization of worst-case scenarios.
Computational results show that computation times and algorithm
gaps are reasonable for practical applications.
Furthermore, we find that the robustness concepts show different
potential depending on the type of data being used.
In this paper we propose a phenomenological model for the formation of an interstitial gap between the tumor and the stroma. The gap
is mainly filled with acid produced by the progressing edge of the tumor front. Our setting extends existing models for acid-induced tumor invasion models to incorporate
several features of local invasion like formation of gaps, spikes, buds, islands, and cavities. These behaviors are obtained mainly due to the random dynamics at the intracellular
level, the go-or-grow-or-recede dynamics on the population scale, together with the nonlinear coupling between the microscopic (intracellular) and macroscopic (population)
levels. The wellposedness of the model is proved using the semigroup technique and 1D and 2D numerical simulations are performed to illustrate model predictions and draw
conclusions based on the observed behavior.
A new solution approach for solving the 2-facility location problem in the plane with block norms
(2015)
Motivated by the time-dependent location problem over T time-periods introduced in
Maier and Hamacher (2015) we consider the special case of two time-steps, which was shown
to be equivalent to the static 2-facility location problem in the plane. Geometric optimality
conditions are stated for the median objective. When using block norms, these conditions
are used to derive a polygon grid inducing a subdivision of the plane based on normal cones,
yielding a new approach to solve the 2-facility location problem in polynomial time. Combinatorial algorithms for the 2-facility location problem based on geometric properties are
deduced and their complexities are analyzed. These methods differ from others as they are
completely working on geometric objects to derive the optimal solution set.
Scheduling-Location (ScheLoc) Problems integrate the separate fields of
scheduling and location problems. In ScheLoc Problems the objective is to
find locations for the machines and a schedule for each machine subject to
some production and location constraints such that some scheduling object-
ive is minimized. In this paper we consider the Discrete Parallel Machine
Makespan (DPMM) ScheLoc Problem where the set of possible machine loc-
ations is discrete and a set of n jobs has to be taken to the machines and
processed such that the makespan is minimized. Since the separate location
and scheduling problem are both NP-hard, so is the corresponding ScheLoc
Problem. Therefore, we propose an integer programming formulation and
different versions of clustering heuristics, where jobs are split into clusters
and each cluster is assigned to one of the possible machine locations. Since
the IP formulation can only be solved for small scale instances we propose
several lower bounds to measure the quality of the clustering heuristics. Ex-
tensive computational tests show the efficiency of the heuristics.
We discuss the problem of evaluating a robust solution.
To this end, we first give a short primer on how to apply robustification approaches to uncertain optimization problems using the assignment problem and the knapsack problem as illustrative examples.
As it is not immediately clear in practice which such robustness approach is suitable for the problem at hand,
we present current approaches for evaluating and comparing robustness from the literature, and introduce the new concept of a scenario curve. Using the methods presented in this paper, an easy guide is given to the decision maker to find, solve and compare the best robust optimization method for his purposes.
We propose and study a strongly coupled PDE-ODE system with tissue-dependent degenerate diffusion and haptotaxis that can serve as a model prototype for cancer cell invasion through the
extracellular matrix. We prove the global existence of weak solutions and illustrate the model behaviour by numerical simulations for a two-dimensional setting.
To write about the history of a subject is a challenge that grows with the number of pages as the original goal of completeness is turning more and more into an impossibility. With this in mind, the present article takes a very narrow approach and uses personal side trips and memories on conferences,
workshops, and summer schools as the stage for some of the most important protagonists and their contributions to the field of Differential-Algebraic Equations (DAEs).
We study an online flow shop scheduling problem where each job consists of several tasks that have to be completed in t different stages and the goal is to maximize the total weight of accepted jobs.
The set of tasks of a job contains one task for each stage and each stage has a dedicated set of identical parallel machines corresponding to it that can only process tasks of this stage. In order to gain the weight (profit) associated with a job j, each of its tasks has to be executed between a task-specific release date and deadline subject to the constraint that all tasks of job j from stages 1, …, i-1 have to be completed before the task of the ith stage can be started. In the online version, jobs arrive over time and all information about the tasks of a job becomes available at the release date of its first task. This model can be used to describe production processes in supply chains when customer orders arrive online.
We show that even the basic version of the offline problem with a single machine in each stage, unit weights, unit processing times, and fixed execution times for all tasks (i.e., deadline minus release date equals processing time) is APX-hard. Moreover, we show that the approximation ratio of any polynomial-time approximation algorithm for this basic version of the problem must depend on the number t of stages.
For the online version of the basic problem, we provide a (2t-1)-competitive deterministic online algorithm and a matching lower bound. Moreover, we provide several (sometimes tight) upper and lower bounds on the competitive ratio of online algorithms for several generalizations of the basic problem involving different weights, arbitrary release dates and deadlines, different processing times of tasks, and several identical machines per stage.
For the prediction of digging forces from a granular material simulation, the
Nonsmooth Contact Dynamics Method is examined. First, the equations of motion
for nonsmooth mechanical systems are laid out. They are a differential
variational inequality that has the same structure as classical discrete algebraic equations. Using a Galerkin projection in time, it becomes possible to derive
nonsmooth versions of the classical SHAK and RATTLE integrators.
A matrix-free Interior Point Method is used for the complementarity
problems that need to be solved in every time step. It is shown that this method
outperforms the Projected Gauss-Jacobi method by several orders of magnitude
and produces the same digging force result as the Discrete Element Method in comparable computing time.
In this paper we consider the problem of decomposing a given integer matrix A into
a positive integer linear combination of consecutive-ones matrices with a bound on the
number of columns per matrix. This problem is of relevance in the realization stage
of intensity modulated radiation therapy (IMRT) using linear accelerators and multileaf
collimators with limited width. Constrained and unconstrained versions of the problem
with the objectives of minimizing beam-on time and decomposition cardinality are considered.
We introduce a new approach which can be used to find the minimum beam-on
time for both constrained and unconstrained versions of the problem. The decomposition
cardinality problem is shown to be NP-hard and an approach is proposed to solve the
lexicographic decomposition problem of minimizing the decomposition cardinality subject
to optimal beam-on time.
In this paper we consider the problem of decomposing a given integer matrix A into
a positive integer linear combination of consecutive-ones matrices with a bound on the
number of columns per matrix. This problem is of relevance in the realization stage
of intensity modulated radiation therapy (IMRT) using linear accelerators and multileaf
collimators with limited width. Constrained and unconstrained versions of the problem
with the objectives of minimizing beam-on time and decomposition cardinality are considered.
We introduce a new approach which can be used to find the minimum beam-on
time for both constrained and unconstrained versions of the problem. The decomposition
cardinality problem is shown to be NP-hard and an approach is proposed to solve the
lexicographic decomposition problem of minimizing the decomposition cardinality subject
to optimal beam-on time.